Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4808 |
| Number of amino acids: | 280 |
| Molecular Weight: | 30219.48 Da |
| Theoretical pI: | 8.91 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 11.07% |
| Cysteine CYS (C) | 8 | 2.86% |
| Glutamic Acid GLU (E) | 1 | 0.36% |
| Aspartic Acid ASP (D) | 15 | 5.36% |
| Glycine GLY (G) | 27 | 9.64% |
| Phynylalanine PHE (F) | 14 | 5% |
| Isoleucine ILE (I) | 10 | 3.57% |
| Histidine HIS (H) | 4 | 1.43% |
| Lysine LYS (K) | 10 | 3.57% |
| Methionine MET (M) | 9 | 3.21% |
| Leucine LEU (L) | 19 | 6.79% |
| Asparagine ASN (N) | 15 | 5.36% |
| Glutamine GLN (Q) | 9 | 3.21% |
| Proline PRO (P) | 18 | 6.43% |
| Serine SER (S) | 17 | 6.07% |
| Arginine ARG (R) | 12 | 4.29% |
| Threonine THR (T) | 25 | 8.93% |
| Tryptophan TRP (W) | 9 | 3.21% |
| Valine VAL (V) | 18 | 6.43% |
| Tyrosine TYR (Y) | 9 | 3.21% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1353 |
| Hydrogen | H | 2059 |
| Nitrogen | N | 367 |
| Oxygen | O | 388 |
| Sulphur | S | 17 |
| Formula | C1353H2059N367O388S17 |
| Total Number of Atoms: | 4184 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 16 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 63410 Absorption 0.1% (=1 g/l) 2.098, assuming all pairs of CYS residues form cystines Ext. coefficient 62910 Absorption 0.1% (=1 g/l) 2.082, assuming all CYS residues are reduced |
| Aromaticity: | 0.114 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.22 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.21, 27.50, 21.43] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.1071 |
| Grand average of hydropathicity (GRAVY): | -0.04 |