Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4794 |
| Number of amino acids: | 344 |
| Molecular Weight: | 38237.09 Da |
| Theoretical pI: | 4.9 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 23 | 6.69% |
| Cysteine CYS (C) | 11 | 3.2% |
| Glutamic Acid GLU (E) | 19 | 5.52% |
| Aspartic Acid ASP (D) | 20 | 5.81% |
| Glycine GLY (G) | 20 | 5.81% |
| Phynylalanine PHE (F) | 16 | 4.65% |
| Isoleucine ILE (I) | 20 | 5.81% |
| Histidine HIS (H) | 6 | 1.74% |
| Lysine LYS (K) | 9 | 2.62% |
| Methionine MET (M) | 11 | 3.2% |
| Leucine LEU (L) | 32 | 9.3% |
| Asparagine ASN (N) | 25 | 7.27% |
| Glutamine GLN (Q) | 16 | 4.65% |
| Proline PRO (P) | 12 | 3.49% |
| Serine SER (S) | 34 | 9.88% |
| Arginine ARG (R) | 17 | 4.94% |
| Threonine THR (T) | 19 | 5.52% |
| Tryptophan TRP (W) | 1 | 0.29% |
| Valine VAL (V) | 20 | 5.81% |
| Tyrosine TYR (Y) | 13 | 3.78% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1666 |
| Hydrogen | H | 2606 |
| Nitrogen | N | 458 |
| Oxygen | O | 530 |
| Sulphur | S | 22 |
| Formula | C1666H2606N458O530S22 |
| Total Number of Atoms: | 5282 |
| Total number of positively charged residues (ARG + LYS): | 26 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 25495 Absorption 0.1% (=1 g/l) 0.667, assuming all pairs of CYS residues form cystines Ext. coefficient 24870 Absorption 0.1% (=1 g/l) 0.650, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 48.74 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.65, 26.45, 24.71] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.5 |
| Grand average of hydropathicity (GRAVY): | -0.19 |