Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4793 |
| Number of amino acids: | 313 |
| Molecular Weight: | 34120.44 Da |
| Theoretical pI: | 6.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 12.46% |
| Cysteine CYS (C) | 11 | 3.51% |
| Glutamic Acid GLU (E) | 19 | 6.07% |
| Aspartic Acid ASP (D) | 20 | 6.39% |
| Glycine GLY (G) | 25 | 7.99% |
| Phynylalanine PHE (F) | 7 | 2.24% |
| Isoleucine ILE (I) | 7 | 2.24% |
| Histidine HIS (H) | 11 | 3.51% |
| Lysine LYS (K) | 4 | 1.28% |
| Methionine MET (M) | 7 | 2.24% |
| Leucine LEU (L) | 24 | 7.67% |
| Asparagine ASN (N) | 6 | 1.92% |
| Glutamine GLN (Q) | 10 | 3.19% |
| Proline PRO (P) | 14 | 4.47% |
| Serine SER (S) | 19 | 6.07% |
| Arginine ARG (R) | 30 | 9.58% |
| Threonine THR (T) | 20 | 6.39% |
| Tryptophan TRP (W) | 5 | 1.6% |
| Valine VAL (V) | 28 | 8.95% |
| Tyrosine TYR (Y) | 7 | 2.24% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1468 |
| Hydrogen | H | 2326 |
| Nitrogen | N | 450 |
| Oxygen | O | 454 |
| Sulphur | S | 18 |
| Formula | C1468H2326N450O454S18 |
| Total Number of Atoms: | 4716 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 38555 Absorption 0.1% (=1 g/l) 1.130, assuming all pairs of CYS residues form cystines Ext. coefficient 37930 Absorption 0.1% (=1 g/l) 1.112, assuming all CYS residues are reduced |
| Aromaticity: | 0.061 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 53.76 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.92, 20.45, 28.43] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.0288 |
| Grand average of hydropathicity (GRAVY): | -0.26 |