Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4791 |
| Number of amino acids: | 625 |
| Molecular Weight: | 69800.13 Da |
| Theoretical pI: | 5.47 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 6.24% |
| Cysteine CYS (C) | 34 | 5.44% |
| Glutamic Acid GLU (E) | 43 | 6.88% |
| Aspartic Acid ASP (D) | 38 | 6.08% |
| Glycine GLY (G) | 51 | 8.16% |
| Phynylalanine PHE (F) | 27 | 4.32% |
| Isoleucine ILE (I) | 34 | 5.44% |
| Histidine HIS (H) | 9 | 1.44% |
| Lysine LYS (K) | 36 | 5.76% |
| Methionine MET (M) | 11 | 1.76% |
| Leucine LEU (L) | 44 | 7.04% |
| Asparagine ASN (N) | 30 | 4.8% |
| Glutamine GLN (Q) | 21 | 3.36% |
| Proline PRO (P) | 28 | 4.48% |
| Serine SER (S) | 42 | 6.72% |
| Arginine ARG (R) | 33 | 5.28% |
| Threonine THR (T) | 35 | 5.6% |
| Tryptophan TRP (W) | 12 | 1.92% |
| Valine VAL (V) | 36 | 5.76% |
| Tyrosine TYR (Y) | 22 | 3.52% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3063 |
| Hydrogen | H | 4743 |
| Nitrogen | N | 841 |
| Oxygen | O | 938 |
| Sulphur | S | 45 |
| Formula | C3063H4743N841O938S45 |
| Total Number of Atoms: | 9630 |
| Total number of positively charged residues (ARG + LYS): | 69 |
| Total number of negatively charged residues (ASP + GLU): | 81 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 100905 Absorption 0.1% (=1 g/l) 1.446, assuming all pairs of CYS residues form cystines Ext. coefficient 98780 Absorption 0.1% (=1 g/l) 1.415, assuming all CYS residues are reduced |
| Aromaticity: | 0.098 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 38.71 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.00, 24.16, 21.92] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.616 |
| Grand average of hydropathicity (GRAVY): | -0.35 |