Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4788 |
| Number of amino acids: | 364 |
| Molecular Weight: | 38693.06 Da |
| Theoretical pI: | 5.55 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 11.26% |
| Cysteine CYS (C) | 11 | 3.02% |
| Glutamic Acid GLU (E) | 12 | 3.3% |
| Aspartic Acid ASP (D) | 21 | 5.77% |
| Glycine GLY (G) | 27 | 7.42% |
| Phynylalanine PHE (F) | 19 | 5.22% |
| Isoleucine ILE (I) | 10 | 2.75% |
| Histidine HIS (H) | 2 | 0.55% |
| Lysine LYS (K) | 15 | 4.12% |
| Methionine MET (M) | 10 | 2.75% |
| Leucine LEU (L) | 39 | 10.71% |
| Asparagine ASN (N) | 25 | 6.87% |
| Glutamine GLN (Q) | 12 | 3.3% |
| Proline PRO (P) | 13 | 3.57% |
| Serine SER (S) | 28 | 7.69% |
| Arginine ARG (R) | 15 | 4.12% |
| Threonine THR (T) | 31 | 8.52% |
| Tryptophan TRP (W) | 2 | 0.55% |
| Valine VAL (V) | 27 | 7.42% |
| Tyrosine TYR (Y) | 4 | 1.1% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1687 |
| Hydrogen | H | 2699 |
| Nitrogen | N | 467 |
| Oxygen | O | 531 |
| Sulphur | S | 21 |
| Formula | C1687H2699N467O531S21 |
| Total Number of Atoms: | 5405 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 33 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 17585 Absorption 0.1% (=1 g/l) 0.454, assuming all pairs of CYS residues form cystines Ext. coefficient 16960 Absorption 0.1% (=1 g/l) 0.438, assuming all CYS residues are reduced |
| Aromaticity: | 0.069 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 20.12 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.75, 25.55, 28.02] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 85.2747 |
| Grand average of hydropathicity (GRAVY): | 0.06 |