Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4786 |
| Number of amino acids: | 622 |
| Molecular Weight: | 68228.83 Da |
| Theoretical pI: | 8.77 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 44 | 7.07% |
| Cysteine CYS (C) | 8 | 1.29% |
| Glutamic Acid GLU (E) | 29 | 4.66% |
| Aspartic Acid ASP (D) | 33 | 5.31% |
| Glycine GLY (G) | 60 | 9.65% |
| Phynylalanine PHE (F) | 40 | 6.43% |
| Isoleucine ILE (I) | 23 | 3.7% |
| Histidine HIS (H) | 14 | 2.25% |
| Lysine LYS (K) | 45 | 7.23% |
| Methionine MET (M) | 10 | 1.61% |
| Leucine LEU (L) | 30 | 4.82% |
| Asparagine ASN (N) | 49 | 7.88% |
| Glutamine GLN (Q) | 12 | 1.93% |
| Proline PRO (P) | 27 | 4.34% |
| Serine SER (S) | 65 | 10.45% |
| Arginine ARG (R) | 25 | 4.02% |
| Threonine THR (T) | 36 | 5.79% |
| Tryptophan TRP (W) | 6 | 0.96% |
| Valine VAL (V) | 38 | 6.11% |
| Tyrosine TYR (Y) | 28 | 4.5% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3023 |
| Hydrogen | H | 4591 |
| Nitrogen | N | 837 |
| Oxygen | O | 937 |
| Sulphur | S | 18 |
| Formula | C3023H4591N837O937S18 |
| Total Number of Atoms: | 9406 |
| Total number of positively charged residues (ARG + LYS): | 70 |
| Total number of negatively charged residues (ASP + GLU): | 62 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 75220 Absorption 0.1% (=1 g/l) 1.102, assuming all pairs of CYS residues form cystines Ext. coefficient 74720 Absorption 0.1% (=1 g/l) 1.095, assuming all CYS residues are reduced |
| Aromaticity: | 0.119 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 26.53 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.53, 32.32, 18.17] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 58.0225 |
| Grand average of hydropathicity (GRAVY): | -0.55 |