Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4783 |
| Number of amino acids: | 269 |
| Molecular Weight: | 29010.73 Da |
| Theoretical pI: | 5.5 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 20 | 7.43% |
| Cysteine CYS (C) | 8 | 2.97% |
| Glutamic Acid GLU (E) | 19 | 7.06% |
| Aspartic Acid ASP (D) | 20 | 7.43% |
| Glycine GLY (G) | 32 | 11.9% |
| Phynylalanine PHE (F) | 10 | 3.72% |
| Isoleucine ILE (I) | 11 | 4.09% |
| Histidine HIS (H) | 5 | 1.86% |
| Lysine LYS (K) | 27 | 10.04% |
| Methionine MET (M) | 5 | 1.86% |
| Leucine LEU (L) | 14 | 5.2% |
| Asparagine ASN (N) | 8 | 2.97% |
| Glutamine GLN (Q) | 2 | 0.74% |
| Proline PRO (P) | 17 | 6.32% |
| Serine SER (S) | 17 | 6.32% |
| Arginine ARG (R) | 6 | 2.23% |
| Threonine THR (T) | 16 | 5.95% |
| Tryptophan TRP (W) | 6 | 2.23% |
| Valine VAL (V) | 18 | 6.69% |
| Tyrosine TYR (Y) | 8 | 2.97% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1286 |
| Hydrogen | H | 1986 |
| Nitrogen | N | 340 |
| Oxygen | O | 399 |
| Sulphur | S | 13 |
| Formula | C1286H1986N340O399S13 |
| Total Number of Atoms: | 4024 |
| Total number of positively charged residues (ARG + LYS): | 33 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 45420 Absorption 0.1% (=1 g/l) 1.566, assuming all pairs of CYS residues form cystines Ext. coefficient 44920 Absorption 0.1% (=1 g/l) 1.548, assuming all CYS residues are reduced |
| Aromaticity: | 0.089 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 22.70 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.91, 27.51, 21.56] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.0855 |
| Grand average of hydropathicity (GRAVY): | -0.48 |