Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4782 |
| Number of amino acids: | 352 |
| Molecular Weight: | 39414.6 Da |
| Theoretical pI: | 8.4 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 19 | 5.4% |
| Cysteine CYS (C) | 9 | 2.56% |
| Glutamic Acid GLU (E) | 16 | 4.55% |
| Aspartic Acid ASP (D) | 19 | 5.4% |
| Glycine GLY (G) | 33 | 9.38% |
| Phynylalanine PHE (F) | 17 | 4.83% |
| Isoleucine ILE (I) | 20 | 5.68% |
| Histidine HIS (H) | 7 | 1.99% |
| Lysine LYS (K) | 31 | 8.81% |
| Methionine MET (M) | 6 | 1.7% |
| Leucine LEU (L) | 24 | 6.82% |
| Asparagine ASN (N) | 20 | 5.68% |
| Glutamine GLN (Q) | 13 | 3.69% |
| Proline PRO (P) | 11 | 3.13% |
| Serine SER (S) | 28 | 7.95% |
| Arginine ARG (R) | 8 | 2.27% |
| Threonine THR (T) | 22 | 6.25% |
| Tryptophan TRP (W) | 6 | 1.7% |
| Valine VAL (V) | 20 | 5.68% |
| Tyrosine TYR (Y) | 23 | 6.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1774 |
| Hydrogen | H | 2698 |
| Nitrogen | N | 460 |
| Oxygen | O | 529 |
| Sulphur | S | 15 |
| Formula | C1774H2698N460O529S15 |
| Total Number of Atoms: | 5476 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 35 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67770 Absorption 0.1% (=1 g/l) 1.719, assuming all pairs of CYS residues form cystines Ext. coefficient 67270 Absorption 0.1% (=1 g/l) 1.707, assuming all CYS residues are reduced |
| Aromaticity: | 0.131 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 24.14 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.25, 26.14, 18.47] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.625 |
| Grand average of hydropathicity (GRAVY): | -0.40 |