Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4777 |
| Number of amino acids: | 628 |
| Molecular Weight: | 69744.11 Da |
| Theoretical pI: | 5.2 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 41 | 6.53% |
| Cysteine CYS (C) | 35 | 5.57% |
| Glutamic Acid GLU (E) | 41 | 6.53% |
| Aspartic Acid ASP (D) | 48 | 7.64% |
| Glycine GLY (G) | 47 | 7.48% |
| Phynylalanine PHE (F) | 21 | 3.34% |
| Isoleucine ILE (I) | 26 | 4.14% |
| Histidine HIS (H) | 9 | 1.43% |
| Lysine LYS (K) | 50 | 7.96% |
| Methionine MET (M) | 12 | 1.91% |
| Leucine LEU (L) | 47 | 7.48% |
| Asparagine ASN (N) | 28 | 4.46% |
| Glutamine GLN (Q) | 22 | 3.5% |
| Proline PRO (P) | 31 | 4.94% |
| Serine SER (S) | 44 | 7.01% |
| Arginine ARG (R) | 22 | 3.5% |
| Threonine THR (T) | 28 | 4.46% |
| Tryptophan TRP (W) | 13 | 2.07% |
| Valine VAL (V) | 42 | 6.69% |
| Tyrosine TYR (Y) | 21 | 3.34% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3055 |
| Hydrogen | H | 4751 |
| Nitrogen | N | 825 |
| Oxygen | O | 950 |
| Sulphur | S | 47 |
| Formula | C3055H4751N825O950S47 |
| Total Number of Atoms: | 9628 |
| Total number of positively charged residues (ARG + LYS): | 72 |
| Total number of negatively charged residues (ASP + GLU): | 89 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 104915 Absorption 0.1% (=1 g/l) 1.504, assuming all pairs of CYS residues form cystines Ext. coefficient 102790 Absorption 0.1% (=1 g/l) 1.474, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.99 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.07, 23.89, 22.45] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 71.258 |
| Grand average of hydropathicity (GRAVY): | -0.41 |