Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4776 |
| Number of amino acids: | 361 |
| Molecular Weight: | 39131.91 Da |
| Theoretical pI: | 5.12 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 10 | 2.77% |
| Cysteine CYS (C) | 56 | 15.51% |
| Glutamic Acid GLU (E) | 20 | 5.54% |
| Aspartic Acid ASP (D) | 21 | 5.82% |
| Glycine GLY (G) | 50 | 13.85% |
| Phynylalanine PHE (F) | 8 | 2.22% |
| Isoleucine ILE (I) | 7 | 1.94% |
| Histidine HIS (H) | 10 | 2.77% |
| Lysine LYS (K) | 11 | 3.05% |
| Methionine MET (M) | 5 | 1.39% |
| Leucine LEU (L) | 20 | 5.54% |
| Asparagine ASN (N) | 17 | 4.71% |
| Glutamine GLN (Q) | 20 | 5.54% |
| Proline PRO (P) | 11 | 3.05% |
| Serine SER (S) | 28 | 7.76% |
| Arginine ARG (R) | 16 | 4.43% |
| Threonine THR (T) | 13 | 3.6% |
| Tryptophan TRP (W) | 13 | 3.6% |
| Valine VAL (V) | 19 | 5.26% |
| Tyrosine TYR (Y) | 6 | 1.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1614 |
| Hydrogen | H | 2460 |
| Nitrogen | N | 490 |
| Oxygen | O | 528 |
| Sulphur | S | 61 |
| Formula | C1614H2460N490O528S61 |
| Total Number of Atoms: | 5153 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 83940 Absorption 0.1% (=1 g/l) 2.145, assuming all pairs of CYS residues form cystines Ext. coefficient 80440 Absorption 0.1% (=1 g/l) 2.056, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 28.54 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [20.22, 29.36, 15.24] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 47.2022 |
| Grand average of hydropathicity (GRAVY): | -0.36 |