Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4775 |
| Number of amino acids: | 782 |
| Molecular Weight: | 87120.14 Da |
| Theoretical pI: | 7.35 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 4.99% |
| Cysteine CYS (C) | 11 | 1.41% |
| Glutamic Acid GLU (E) | 50 | 6.39% |
| Aspartic Acid ASP (D) | 33 | 4.22% |
| Glycine GLY (G) | 32 | 4.09% |
| Phynylalanine PHE (F) | 46 | 5.88% |
| Isoleucine ILE (I) | 30 | 3.84% |
| Histidine HIS (H) | 17 | 2.17% |
| Lysine LYS (K) | 36 | 4.6% |
| Methionine MET (M) | 17 | 2.17% |
| Leucine LEU (L) | 88 | 11.25% |
| Asparagine ASN (N) | 36 | 4.6% |
| Glutamine GLN (Q) | 24 | 3.07% |
| Proline PRO (P) | 66 | 8.44% |
| Serine SER (S) | 108 | 13.81% |
| Arginine ARG (R) | 47 | 6.01% |
| Threonine THR (T) | 39 | 4.99% |
| Tryptophan TRP (W) | 6 | 0.77% |
| Valine VAL (V) | 45 | 5.75% |
| Tyrosine TYR (Y) | 12 | 1.53% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3876 |
| Hydrogen | H | 6099 |
| Nitrogen | N | 1059 |
| Oxygen | O | 1168 |
| Sulphur | S | 28 |
| Formula | C3876H6099N1059O1168S28 |
| Total Number of Atoms: | 12230 |
| Total number of positively charged residues (ARG + LYS): | 83 |
| Total number of negatively charged residues (ASP + GLU): | 83 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 51505 Absorption 0.1% (=1 g/l) 0.591, assuming all pairs of CYS residues form cystines Ext. coefficient 50880 Absorption 0.1% (=1 g/l) 0.584, assuming all CYS residues are reduced |
| Aromaticity: | 0.082 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 67.31 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.03, 30.95, 24.81] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 80.5243 |
| Grand average of hydropathicity (GRAVY): | -0.31 |