Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4768 |
| Number of amino acids: | 401 |
| Molecular Weight: | 44406.9 Da |
| Theoretical pI: | 8.51 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 28 | 6.98% |
| Cysteine CYS (C) | 10 | 2.49% |
| Glutamic Acid GLU (E) | 11 | 2.74% |
| Aspartic Acid ASP (D) | 23 | 5.74% |
| Glycine GLY (G) | 36 | 8.98% |
| Phynylalanine PHE (F) | 11 | 2.74% |
| Isoleucine ILE (I) | 34 | 8.48% |
| Histidine HIS (H) | 21 | 5.24% |
| Lysine LYS (K) | 12 | 2.99% |
| Methionine MET (M) | 11 | 2.74% |
| Leucine LEU (L) | 22 | 5.49% |
| Asparagine ASN (N) | 32 | 7.98% |
| Glutamine GLN (Q) | 10 | 2.49% |
| Proline PRO (P) | 17 | 4.24% |
| Serine SER (S) | 37 | 9.23% |
| Arginine ARG (R) | 26 | 6.48% |
| Threonine THR (T) | 20 | 4.99% |
| Tryptophan TRP (W) | 10 | 2.49% |
| Valine VAL (V) | 19 | 4.74% |
| Tyrosine TYR (Y) | 11 | 2.74% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1935 |
| Hydrogen | H | 2995 |
| Nitrogen | N | 585 |
| Oxygen | O | 580 |
| Sulphur | S | 21 |
| Formula | C1935H2995N585O580S21 |
| Total Number of Atoms: | 6116 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 34 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 72015 Absorption 0.1% (=1 g/l) 1.622, assuming all pairs of CYS residues form cystines Ext. coefficient 71390 Absorption 0.1% (=1 g/l) 1.608, assuming all CYS residues are reduced |
| Aromaticity: | 0.080 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 42.43 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [26.68, 30.42, 17.96] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.187 |
| Grand average of hydropathicity (GRAVY): | -0.40 |