Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4762 |
| Number of amino acids: | 258 |
| Molecular Weight: | 29289.69 Da |
| Theoretical pI: | 6.88 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 13 | 5.04% |
| Cysteine CYS (C) | 16 | 6.2% |
| Glutamic Acid GLU (E) | 24 | 9.3% |
| Aspartic Acid ASP (D) | 8 | 3.1% |
| Glycine GLY (G) | 17 | 6.59% |
| Phynylalanine PHE (F) | 5 | 1.94% |
| Isoleucine ILE (I) | 14 | 5.43% |
| Histidine HIS (H) | 2 | 0.78% |
| Lysine LYS (K) | 7 | 2.71% |
| Methionine MET (M) | 5 | 1.94% |
| Leucine LEU (L) | 15 | 5.81% |
| Asparagine ASN (N) | 7 | 2.71% |
| Glutamine GLN (Q) | 44 | 17.05% |
| Proline PRO (P) | 7 | 2.71% |
| Serine SER (S) | 24 | 9.3% |
| Arginine ARG (R) | 25 | 9.69% |
| Threonine THR (T) | 9 | 3.49% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 12 | 4.65% |
| Tyrosine TYR (Y) | 4 | 1.55% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1208 |
| Hydrogen | H | 1983 |
| Nitrogen | N | 395 |
| Oxygen | O | 411 |
| Sulphur | S | 21 |
| Formula | C1208H1983N395O411S21 |
| Total Number of Atoms: | 4018 |
| Total number of positively charged residues (ARG + LYS): | 32 |
| Total number of negatively charged residues (ASP + GLU): | 32 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 6960 Absorption 0.1% (=1 g/l) 0.238, assuming all pairs of CYS residues form cystines Ext. coefficient 5960 Absorption 0.1% (=1 g/l) 0.203, assuming all CYS residues are reduced |
| Aromaticity: | 0.035 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 78.02 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [19.38, 21.32, 22.09] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 62.3643 |
| Grand average of hydropathicity (GRAVY): | -0.88 |