Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4758 |
| Number of amino acids: | 358 |
| Molecular Weight: | 38959.07 Da |
| Theoretical pI: | 6.28 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 31 | 8.66% |
| Cysteine CYS (C) | 9 | 2.51% |
| Glutamic Acid GLU (E) | 22 | 6.15% |
| Aspartic Acid ASP (D) | 16 | 4.47% |
| Glycine GLY (G) | 35 | 9.78% |
| Phynylalanine PHE (F) | 15 | 4.19% |
| Isoleucine ILE (I) | 14 | 3.91% |
| Histidine HIS (H) | 8 | 2.23% |
| Lysine LYS (K) | 24 | 6.7% |
| Methionine MET (M) | 7 | 1.96% |
| Leucine LEU (L) | 27 | 7.54% |
| Asparagine ASN (N) | 17 | 4.75% |
| Glutamine GLN (Q) | 13 | 3.63% |
| Proline PRO (P) | 9 | 2.51% |
| Serine SER (S) | 31 | 8.66% |
| Arginine ARG (R) | 11 | 3.07% |
| Threonine THR (T) | 18 | 5.03% |
| Tryptophan TRP (W) | 6 | 1.68% |
| Valine VAL (V) | 31 | 8.66% |
| Tyrosine TYR (Y) | 14 | 3.91% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1728 |
| Hydrogen | H | 2681 |
| Nitrogen | N | 467 |
| Oxygen | O | 528 |
| Sulphur | S | 16 |
| Formula | C1728H2681N467O528S16 |
| Total Number of Atoms: | 5420 |
| Total number of positively charged residues (ARG + LYS): | 35 |
| Total number of negatively charged residues (ASP + GLU): | 38 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 54360 Absorption 0.1% (=1 g/l) 1.395, assuming all pairs of CYS residues form cystines Ext. coefficient 53860 Absorption 0.1% (=1 g/l) 1.382, assuming all CYS residues are reduced |
| Aromaticity: | 0.098 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 26.83 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.89, 25.70, 24.30] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.4357 |
| Grand average of hydropathicity (GRAVY): | -0.19 |