Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4754 |
| Number of amino acids: | 314 |
| Molecular Weight: | 33854.89 Da |
| Theoretical pI: | 8.52 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 7.64% |
| Cysteine CYS (C) | 4 | 1.27% |
| Glutamic Acid GLU (E) | 17 | 5.41% |
| Aspartic Acid ASP (D) | 10 | 3.18% |
| Glycine GLY (G) | 27 | 8.6% |
| Phynylalanine PHE (F) | 16 | 5.1% |
| Isoleucine ILE (I) | 27 | 8.6% |
| Histidine HIS (H) | 2 | 0.64% |
| Lysine LYS (K) | 25 | 7.96% |
| Methionine MET (M) | 1 | 0.32% |
| Leucine LEU (L) | 26 | 8.28% |
| Asparagine ASN (N) | 21 | 6.69% |
| Glutamine GLN (Q) | 19 | 6.05% |
| Proline PRO (P) | 17 | 5.41% |
| Serine SER (S) | 20 | 6.37% |
| Arginine ARG (R) | 5 | 1.59% |
| Threonine THR (T) | 18 | 5.73% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 26 | 8.28% |
| Tyrosine TYR (Y) | 9 | 2.87% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1529 |
| Hydrogen | H | 2440 |
| Nitrogen | N | 398 |
| Oxygen | O | 456 |
| Sulphur | S | 5 |
| Formula | C1529H2440N398O456S5 |
| Total Number of Atoms: | 4828 |
| Total number of positively charged residues (ARG + LYS): | 30 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13660 Absorption 0.1% (=1 g/l) 0.403, assuming all pairs of CYS residues form cystines Ext. coefficient 13410 Absorption 0.1% (=1 g/l) 0.396, assuming all CYS residues are reduced |
| Aromaticity: | 0.080 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.98 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.12, 27.07, 21.66] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 97.4841 |
| Grand average of hydropathicity (GRAVY): | -0.03 |