Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4753 |
| Number of amino acids: | 315 |
| Molecular Weight: | 34212.85 Da |
| Theoretical pI: | 9.01 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 7.62% |
| Cysteine CYS (C) | 3 | 0.95% |
| Glutamic Acid GLU (E) | 19 | 6.03% |
| Aspartic Acid ASP (D) | 9 | 2.86% |
| Glycine GLY (G) | 27 | 8.57% |
| Phynylalanine PHE (F) | 18 | 5.71% |
| Isoleucine ILE (I) | 21 | 6.67% |
| Histidine HIS (H) | 1 | 0.32% |
| Lysine LYS (K) | 27 | 8.57% |
| Methionine MET (M) | 4 | 1.27% |
| Leucine LEU (L) | 28 | 8.89% |
| Asparagine ASN (N) | 16 | 5.08% |
| Glutamine GLN (Q) | 14 | 4.44% |
| Proline PRO (P) | 24 | 7.62% |
| Serine SER (S) | 15 | 4.76% |
| Arginine ARG (R) | 7 | 2.22% |
| Threonine THR (T) | 15 | 4.76% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 32 | 10.16% |
| Tyrosine TYR (Y) | 11 | 3.49% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1570 |
| Hydrogen | H | 2491 |
| Nitrogen | N | 395 |
| Oxygen | O | 443 |
| Sulphur | S | 7 |
| Formula | C1570H2491N395O443S7 |
| Total Number of Atoms: | 4906 |
| Total number of positively charged residues (ARG + LYS): | 34 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 16515 Absorption 0.1% (=1 g/l) 0.483, assuming all pairs of CYS residues form cystines Ext. coefficient 16390 Absorption 0.1% (=1 g/l) 0.479, assuming all CYS residues are reduced |
| Aromaticity: | 0.092 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.55 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [34.92, 26.03, 23.81] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 97.746 |
| Grand average of hydropathicity (GRAVY): | 0.05 |