Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4751 |
| Number of amino acids: | 248 |
| Molecular Weight: | 25064.85 Da |
| Theoretical pI: | 7.71 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 37 | 14.92% |
| Cysteine CYS (C) | 8 | 3.23% |
| Glutamic Acid GLU (E) | 4 | 1.61% |
| Aspartic Acid ASP (D) | 8 | 3.23% |
| Glycine GLY (G) | 40 | 16.13% |
| Phynylalanine PHE (F) | 11 | 4.44% |
| Isoleucine ILE (I) | 3 | 1.21% |
| Histidine HIS (H) | 3 | 1.21% |
| Lysine LYS (K) | 2 | 0.81% |
| Methionine MET (M) | 5 | 2.02% |
| Leucine LEU (L) | 14 | 5.65% |
| Asparagine ASN (N) | 13 | 5.24% |
| Glutamine GLN (Q) | 9 | 3.63% |
| Proline PRO (P) | 9 | 3.63% |
| Serine SER (S) | 22 | 8.87% |
| Arginine ARG (R) | 11 | 4.44% |
| Threonine THR (T) | 17 | 6.85% |
| Tryptophan TRP (W) | 6 | 2.42% |
| Valine VAL (V) | 19 | 7.66% |
| Tyrosine TYR (Y) | 7 | 2.82% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1089 |
| Hydrogen | H | 1659 |
| Nitrogen | N | 317 |
| Oxygen | O | 341 |
| Sulphur | S | 13 |
| Formula | C1089H1659N317O341S13 |
| Total Number of Atoms: | 3419 |
| Total number of positively charged residues (ARG + LYS): | 13 |
| Total number of negatively charged residues (ASP + GLU): | 12 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 43930 Absorption 0.1% (=1 g/l) 1.753, assuming all pairs of CYS residues form cystines Ext. coefficient 43430 Absorption 0.1% (=1 g/l) 1.733, assuming all CYS residues are reduced |
| Aromaticity: | 0.097 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.97 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [24.19, 33.87, 24.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 63.871 |
| Grand average of hydropathicity (GRAVY): | 0.05 |