Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4747 |
| Number of amino acids: | 456 |
| Molecular Weight: | 51202.65 Da |
| Theoretical pI: | 8.93 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 26 | 5.7% |
| Cysteine CYS (C) | 17 | 3.73% |
| Glutamic Acid GLU (E) | 11 | 2.41% |
| Aspartic Acid ASP (D) | 17 | 3.73% |
| Glycine GLY (G) | 28 | 6.14% |
| Phynylalanine PHE (F) | 29 | 6.36% |
| Isoleucine ILE (I) | 19 | 4.17% |
| Histidine HIS (H) | 7 | 1.54% |
| Lysine LYS (K) | 23 | 5.04% |
| Methionine MET (M) | 12 | 2.63% |
| Leucine LEU (L) | 29 | 6.36% |
| Asparagine ASN (N) | 26 | 5.7% |
| Glutamine GLN (Q) | 20 | 4.39% |
| Proline PRO (P) | 32 | 7.02% |
| Serine SER (S) | 36 | 7.89% |
| Arginine ARG (R) | 17 | 3.73% |
| Threonine THR (T) | 43 | 9.43% |
| Tryptophan TRP (W) | 14 | 3.07% |
| Valine VAL (V) | 33 | 7.24% |
| Tyrosine TYR (Y) | 17 | 3.73% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2315 |
| Hydrogen | H | 3500 |
| Nitrogen | N | 604 |
| Oxygen | O | 655 |
| Sulphur | S | 29 |
| Formula | C2315H3500N604O655S29 |
| Total Number of Atoms: | 7103 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 28 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 103330 Absorption 0.1% (=1 g/l) 2.018, assuming all pairs of CYS residues form cystines Ext. coefficient 102330 Absorption 0.1% (=1 g/l) 1.999, assuming all CYS residues are reduced |
| Aromaticity: | 0.132 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 39.59 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.92, 26.75, 17.11] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 67.7412 |
| Grand average of hydropathicity (GRAVY): | -0.17 |