Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4744 |
| Number of amino acids: | 408 |
| Molecular Weight: | 45376.48 Da |
| Theoretical pI: | 6.74 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 8.82% |
| Cysteine CYS (C) | 4 | 0.98% |
| Glutamic Acid GLU (E) | 17 | 4.17% |
| Aspartic Acid ASP (D) | 26 | 6.37% |
| Glycine GLY (G) | 32 | 7.84% |
| Phynylalanine PHE (F) | 23 | 5.64% |
| Isoleucine ILE (I) | 29 | 7.11% |
| Histidine HIS (H) | 7 | 1.72% |
| Lysine LYS (K) | 24 | 5.88% |
| Methionine MET (M) | 8 | 1.96% |
| Leucine LEU (L) | 30 | 7.35% |
| Asparagine ASN (N) | 26 | 6.37% |
| Glutamine GLN (Q) | 12 | 2.94% |
| Proline PRO (P) | 14 | 3.43% |
| Serine SER (S) | 29 | 7.11% |
| Arginine ARG (R) | 18 | 4.41% |
| Threonine THR (T) | 23 | 5.64% |
| Tryptophan TRP (W) | 9 | 2.21% |
| Valine VAL (V) | 26 | 6.37% |
| Tyrosine TYR (Y) | 15 | 3.68% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2045 |
| Hydrogen | H | 3143 |
| Nitrogen | N | 547 |
| Oxygen | O | 600 |
| Sulphur | S | 12 |
| Formula | C2045H3143N547O600S12 |
| Total Number of Atoms: | 6347 |
| Total number of positively charged residues (ARG + LYS): | 42 |
| Total number of negatively charged residues (ASP + GLU): | 43 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 72100 Absorption 0.1% (=1 g/l) 1.589, assuming all pairs of CYS residues form cystines Ext. coefficient 71850 Absorption 0.1% (=1 g/l) 1.583, assuming all CYS residues are reduced |
| Aromaticity: | 0.115 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.67 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.35, 24.75, 22.30] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.701 |
| Grand average of hydropathicity (GRAVY): | -0.18 |