Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4740 |
| Number of amino acids: | 268 |
| Molecular Weight: | 29999.35 Da |
| Theoretical pI: | 6.93 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 17 | 6.34% |
| Cysteine CYS (C) | 8 | 2.99% |
| Glutamic Acid GLU (E) | 13 | 4.85% |
| Aspartic Acid ASP (D) | 13 | 4.85% |
| Glycine GLY (G) | 11 | 4.1% |
| Phynylalanine PHE (F) | 14 | 5.22% |
| Isoleucine ILE (I) | 14 | 5.22% |
| Histidine HIS (H) | 12 | 4.48% |
| Lysine LYS (K) | 18 | 6.72% |
| Methionine MET (M) | 6 | 2.24% |
| Leucine LEU (L) | 22 | 8.21% |
| Asparagine ASN (N) | 14 | 5.22% |
| Glutamine GLN (Q) | 8 | 2.99% |
| Proline PRO (P) | 13 | 4.85% |
| Serine SER (S) | 23 | 8.58% |
| Arginine ARG (R) | 7 | 2.61% |
| Threonine THR (T) | 21 | 7.84% |
| Tryptophan TRP (W) | 4 | 1.49% |
| Valine VAL (V) | 23 | 8.58% |
| Tyrosine TYR (Y) | 7 | 2.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1344 |
| Hydrogen | H | 2087 |
| Nitrogen | N | 357 |
| Oxygen | O | 394 |
| Sulphur | S | 14 |
| Formula | C1344H2087N357O394S14 |
| Total Number of Atoms: | 4196 |
| Total number of positively charged residues (ARG + LYS): | 25 |
| Total number of negatively charged residues (ASP + GLU): | 26 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 32930 Absorption 0.1% (=1 g/l) 1.098, assuming all pairs of CYS residues form cystines Ext. coefficient 32430 Absorption 0.1% (=1 g/l) 1.081, assuming all CYS residues are reduced |
| Aromaticity: | 0.093 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.57 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.34, 22.76, 21.64] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.6194 |
| Grand average of hydropathicity (GRAVY): | -0.13 |