Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4739 |
| Number of amino acids: | 570 |
| Molecular Weight: | 64026.98 Da |
| Theoretical pI: | 9.67 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 44 | 7.72% |
| Cysteine CYS (C) | 7 | 1.23% |
| Glutamic Acid GLU (E) | 13 | 2.28% |
| Aspartic Acid ASP (D) | 20 | 3.51% |
| Glycine GLY (G) | 44 | 7.72% |
| Phynylalanine PHE (F) | 34 | 5.96% |
| Isoleucine ILE (I) | 31 | 5.44% |
| Histidine HIS (H) | 15 | 2.63% |
| Lysine LYS (K) | 11 | 1.93% |
| Methionine MET (M) | 12 | 2.11% |
| Leucine LEU (L) | 39 | 6.84% |
| Asparagine ASN (N) | 37 | 6.49% |
| Glutamine GLN (Q) | 30 | 5.26% |
| Proline PRO (P) | 49 | 8.6% |
| Serine SER (S) | 26 | 4.56% |
| Arginine ARG (R) | 40 | 7.02% |
| Threonine THR (T) | 44 | 7.72% |
| Tryptophan TRP (W) | 12 | 2.11% |
| Valine VAL (V) | 38 | 6.67% |
| Tyrosine TYR (Y) | 24 | 4.21% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2903 |
| Hydrogen | H | 4402 |
| Nitrogen | N | 810 |
| Oxygen | O | 798 |
| Sulphur | S | 19 |
| Formula | C2903H4402N810O798S19 |
| Total Number of Atoms: | 8932 |
| Total number of positively charged residues (ARG + LYS): | 51 |
| Total number of negatively charged residues (ASP + GLU): | 33 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 102135 Absorption 0.1% (=1 g/l) 1.595, assuming all pairs of CYS residues form cystines Ext. coefficient 101760 Absorption 0.1% (=1 g/l) 1.589, assuming all CYS residues are reduced |
| Aromaticity: | 0.123 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.80 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.23, 27.37, 18.95] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.9474 |
| Grand average of hydropathicity (GRAVY): | -0.26 |