Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4738 |
| Number of amino acids: | 492 |
| Molecular Weight: | 54610.37 Da |
| Theoretical pI: | 9.33 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 44 | 8.94% |
| Cysteine CYS (C) | 6 | 1.22% |
| Glutamic Acid GLU (E) | 15 | 3.05% |
| Aspartic Acid ASP (D) | 27 | 5.49% |
| Glycine GLY (G) | 42 | 8.54% |
| Phynylalanine PHE (F) | 25 | 5.08% |
| Isoleucine ILE (I) | 23 | 4.67% |
| Histidine HIS (H) | 14 | 2.85% |
| Lysine LYS (K) | 25 | 5.08% |
| Methionine MET (M) | 9 | 1.83% |
| Leucine LEU (L) | 46 | 9.35% |
| Asparagine ASN (N) | 19 | 3.86% |
| Glutamine GLN (Q) | 13 | 2.64% |
| Proline PRO (P) | 28 | 5.69% |
| Serine SER (S) | 42 | 8.54% |
| Arginine ARG (R) | 31 | 6.3% |
| Threonine THR (T) | 18 | 3.66% |
| Tryptophan TRP (W) | 8 | 1.63% |
| Valine VAL (V) | 32 | 6.5% |
| Tyrosine TYR (Y) | 25 | 5.08% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2473 |
| Hydrogen | H | 3796 |
| Nitrogen | N | 678 |
| Oxygen | O | 694 |
| Sulphur | S | 15 |
| Formula | C2473H3796N678O694S15 |
| Total Number of Atoms: | 7656 |
| Total number of positively charged residues (ARG + LYS): | 56 |
| Total number of negatively charged residues (ASP + GLU): | 42 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 81625 Absorption 0.1% (=1 g/l) 1.495, assuming all pairs of CYS residues form cystines Ext. coefficient 81250 Absorption 0.1% (=1 g/l) 1.488, assuming all CYS residues are reduced |
| Aromaticity: | 0.118 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.51 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.32, 26.63, 23.17] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.5 |
| Grand average of hydropathicity (GRAVY): | -0.19 |