Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4737 |
| Number of amino acids: | 495 |
| Molecular Weight: | 56046.88 Da |
| Theoretical pI: | 9.11 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 7.07% |
| Cysteine CYS (C) | 7 | 1.41% |
| Glutamic Acid GLU (E) | 28 | 5.66% |
| Aspartic Acid ASP (D) | 11 | 2.22% |
| Glycine GLY (G) | 32 | 6.46% |
| Phynylalanine PHE (F) | 29 | 5.86% |
| Isoleucine ILE (I) | 26 | 5.25% |
| Histidine HIS (H) | 10 | 2.02% |
| Lysine LYS (K) | 16 | 3.23% |
| Methionine MET (M) | 6 | 1.21% |
| Leucine LEU (L) | 34 | 6.87% |
| Asparagine ASN (N) | 35 | 7.07% |
| Glutamine GLN (Q) | 54 | 10.91% |
| Proline PRO (P) | 21 | 4.24% |
| Serine SER (S) | 42 | 8.48% |
| Arginine ARG (R) | 32 | 6.46% |
| Threonine THR (T) | 20 | 4.04% |
| Tryptophan TRP (W) | 4 | 0.81% |
| Valine VAL (V) | 34 | 6.87% |
| Tyrosine TYR (Y) | 19 | 3.84% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2479 |
| Hydrogen | H | 3836 |
| Nitrogen | N | 720 |
| Oxygen | O | 744 |
| Sulphur | S | 13 |
| Formula | C2479H3836N720O744S13 |
| Total Number of Atoms: | 7792 |
| Total number of positively charged residues (ARG + LYS): | 48 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 50685 Absorption 0.1% (=1 g/l) 0.904, assuming all pairs of CYS residues form cystines Ext. coefficient 50310 Absorption 0.1% (=1 g/l) 0.898, assuming all CYS residues are reduced |
| Aromaticity: | 0.105 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 51.63 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.49, 26.26, 20.81] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 74.2627 |
| Grand average of hydropathicity (GRAVY): | -0.50 |