Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4731 |
| Number of amino acids: | 847 |
| Molecular Weight: | 93658.66 Da |
| Theoretical pI: | 8.8 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 61 | 7.2% |
| Cysteine CYS (C) | 20 | 2.36% |
| Glutamic Acid GLU (E) | 36 | 4.25% |
| Aspartic Acid ASP (D) | 32 | 3.78% |
| Glycine GLY (G) | 87 | 10.27% |
| Phynylalanine PHE (F) | 36 | 4.25% |
| Isoleucine ILE (I) | 33 | 3.9% |
| Histidine HIS (H) | 21 | 2.48% |
| Lysine LYS (K) | 49 | 5.79% |
| Methionine MET (M) | 23 | 2.72% |
| Leucine LEU (L) | 62 | 7.32% |
| Asparagine ASN (N) | 43 | 5.08% |
| Glutamine GLN (Q) | 27 | 3.19% |
| Proline PRO (P) | 52 | 6.14% |
| Serine SER (S) | 66 | 7.79% |
| Arginine ARG (R) | 33 | 3.9% |
| Threonine THR (T) | 41 | 4.84% |
| Tryptophan TRP (W) | 25 | 2.95% |
| Valine VAL (V) | 58 | 6.85% |
| Tyrosine TYR (Y) | 42 | 4.96% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4224 |
| Hydrogen | H | 6392 |
| Nitrogen | N | 1132 |
| Oxygen | O | 1203 |
| Sulphur | S | 43 |
| Formula | C4224H6392N1132O1203S43 |
| Total Number of Atoms: | 12994 |
| Total number of positively charged residues (ARG + LYS): | 82 |
| Total number of negatively charged residues (ASP + GLU): | 68 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 201330 Absorption 0.1% (=1 g/l) 2.150, assuming all pairs of CYS residues form cystines Ext. coefficient 200080 Absorption 0.1% (=1 g/l) 2.136, assuming all CYS residues are reduced |
| Aromaticity: | 0.122 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.46 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.22, 29.28, 21.49] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.8028 |
| Grand average of hydropathicity (GRAVY): | -0.28 |