Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4727 |
| Number of amino acids: | 476 |
| Molecular Weight: | 52625.12 Da |
| Theoretical pI: | 6.17 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 51 | 10.71% |
| Cysteine CYS (C) | 7 | 1.47% |
| Glutamic Acid GLU (E) | 18 | 3.78% |
| Aspartic Acid ASP (D) | 26 | 5.46% |
| Glycine GLY (G) | 38 | 7.98% |
| Phynylalanine PHE (F) | 16 | 3.36% |
| Isoleucine ILE (I) | 15 | 3.15% |
| Histidine HIS (H) | 14 | 2.94% |
| Lysine LYS (K) | 6 | 1.26% |
| Methionine MET (M) | 8 | 1.68% |
| Leucine LEU (L) | 43 | 9.03% |
| Asparagine ASN (N) | 18 | 3.78% |
| Glutamine GLN (Q) | 12 | 2.52% |
| Proline PRO (P) | 28 | 5.88% |
| Serine SER (S) | 36 | 7.56% |
| Arginine ARG (R) | 32 | 6.72% |
| Threonine THR (T) | 34 | 7.14% |
| Tryptophan TRP (W) | 12 | 2.52% |
| Valine VAL (V) | 33 | 6.93% |
| Tyrosine TYR (Y) | 29 | 6.09% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2362 |
| Hydrogen | H | 3566 |
| Nitrogen | N | 648 |
| Oxygen | O | 694 |
| Sulphur | S | 15 |
| Formula | C2362H3566N648O694S15 |
| Total Number of Atoms: | 7285 |
| Total number of positively charged residues (ARG + LYS): | 38 |
| Total number of negatively charged residues (ASP + GLU): | 44 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 109585 Absorption 0.1% (=1 g/l) 2.082, assuming all pairs of CYS residues form cystines Ext. coefficient 109210 Absorption 0.1% (=1 g/l) 2.075, assuming all CYS residues are reduced |
| Aromaticity: | 0.120 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 51.88 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.09, 25.21, 25.21] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.3403 |
| Grand average of hydropathicity (GRAVY): | -0.20 |