Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4724 |
| Number of amino acids: | 491 |
| Molecular Weight: | 53197.76 Da |
| Theoretical pI: | 5.33 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 66 | 13.44% |
| Cysteine CYS (C) | 7 | 1.43% |
| Glutamic Acid GLU (E) | 20 | 4.07% |
| Aspartic Acid ASP (D) | 29 | 5.91% |
| Glycine GLY (G) | 39 | 7.94% |
| Phynylalanine PHE (F) | 20 | 4.07% |
| Isoleucine ILE (I) | 18 | 3.67% |
| Histidine HIS (H) | 10 | 2.04% |
| Lysine LYS (K) | 23 | 4.68% |
| Methionine MET (M) | 12 | 2.44% |
| Leucine LEU (L) | 41 | 8.35% |
| Asparagine ASN (N) | 26 | 5.3% |
| Glutamine GLN (Q) | 22 | 4.48% |
| Proline PRO (P) | 25 | 5.09% |
| Serine SER (S) | 35 | 7.13% |
| Arginine ARG (R) | 14 | 2.85% |
| Threonine THR (T) | 27 | 5.5% |
| Tryptophan TRP (W) | 10 | 2.04% |
| Valine VAL (V) | 25 | 5.09% |
| Tyrosine TYR (Y) | 22 | 4.48% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2374 |
| Hydrogen | H | 3614 |
| Nitrogen | N | 634 |
| Oxygen | O | 722 |
| Sulphur | S | 19 |
| Formula | C2374H3614N634O722S19 |
| Total Number of Atoms: | 7363 |
| Total number of positively charged residues (ARG + LYS): | 37 |
| Total number of negatively charged residues (ASP + GLU): | 49 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 88155 Absorption 0.1% (=1 g/l) 1.657, assuming all pairs of CYS residues form cystines Ext. coefficient 87780 Absorption 0.1% (=1 g/l) 1.650, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 27.89 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.70, 25.46, 28.31] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.0714 |
| Grand average of hydropathicity (GRAVY): | -0.22 |