Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4723 |
| Number of amino acids: | 491 |
| Molecular Weight: | 53421.48 Da |
| Theoretical pI: | 8.72 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 60 | 12.22% |
| Cysteine CYS (C) | 7 | 1.43% |
| Glutamic Acid GLU (E) | 16 | 3.26% |
| Aspartic Acid ASP (D) | 23 | 4.68% |
| Glycine GLY (G) | 41 | 8.35% |
| Phynylalanine PHE (F) | 17 | 3.46% |
| Isoleucine ILE (I) | 18 | 3.67% |
| Histidine HIS (H) | 11 | 2.24% |
| Lysine LYS (K) | 30 | 6.11% |
| Methionine MET (M) | 14 | 2.85% |
| Leucine LEU (L) | 40 | 8.15% |
| Asparagine ASN (N) | 28 | 5.7% |
| Glutamine GLN (Q) | 23 | 4.68% |
| Proline PRO (P) | 24 | 4.89% |
| Serine SER (S) | 38 | 7.74% |
| Arginine ARG (R) | 15 | 3.05% |
| Threonine THR (T) | 26 | 5.3% |
| Tryptophan TRP (W) | 10 | 2.04% |
| Valine VAL (V) | 26 | 5.3% |
| Tyrosine TYR (Y) | 24 | 4.89% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2383 |
| Hydrogen | H | 3663 |
| Nitrogen | N | 649 |
| Oxygen | O | 709 |
| Sulphur | S | 21 |
| Formula | C2383H3663N649O709S21 |
| Total Number of Atoms: | 7425 |
| Total number of positively charged residues (ARG + LYS): | 45 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 91135 Absorption 0.1% (=1 g/l) 1.706, assuming all pairs of CYS residues form cystines Ext. coefficient 90760 Absorption 0.1% (=1 g/l) 1.699, assuming all CYS residues are reduced |
| Aromaticity: | 0.104 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.99 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [27.49, 26.68, 26.48] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 73.6457 |
| Grand average of hydropathicity (GRAVY): | -0.28 |