Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4722 |
| Number of amino acids: | 492 |
| Molecular Weight: | 53591.44 Da |
| Theoretical pI: | 5.54 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 60 | 12.2% |
| Cysteine CYS (C) | 9 | 1.83% |
| Glutamic Acid GLU (E) | 21 | 4.27% |
| Aspartic Acid ASP (D) | 30 | 6.1% |
| Glycine GLY (G) | 40 | 8.13% |
| Phynylalanine PHE (F) | 18 | 3.66% |
| Isoleucine ILE (I) | 19 | 3.86% |
| Histidine HIS (H) | 13 | 2.64% |
| Lysine LYS (K) | 25 | 5.08% |
| Methionine MET (M) | 11 | 2.24% |
| Leucine LEU (L) | 46 | 9.35% |
| Asparagine ASN (N) | 24 | 4.88% |
| Glutamine GLN (Q) | 18 | 3.66% |
| Proline PRO (P) | 27 | 5.49% |
| Serine SER (S) | 34 | 6.91% |
| Arginine ARG (R) | 14 | 2.85% |
| Threonine THR (T) | 25 | 5.08% |
| Tryptophan TRP (W) | 10 | 2.03% |
| Valine VAL (V) | 24 | 4.88% |
| Tyrosine TYR (Y) | 24 | 4.88% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2400 |
| Hydrogen | H | 3653 |
| Nitrogen | N | 637 |
| Oxygen | O | 720 |
| Sulphur | S | 20 |
| Formula | C2400H3653N637O720S20 |
| Total Number of Atoms: | 7430 |
| Total number of positively charged residues (ARG + LYS): | 39 |
| Total number of negatively charged residues (ASP + GLU): | 51 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 91260 Absorption 0.1% (=1 g/l) 1.703, assuming all pairs of CYS residues form cystines Ext. coefficient 90760 Absorption 0.1% (=1 g/l) 1.694, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 29.01 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.66, 25.41, 28.05] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.8658 |
| Grand average of hydropathicity (GRAVY): | -0.22 |