Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4721 |
| Number of amino acids: | 499 |
| Molecular Weight: | 54426.71 Da |
| Theoretical pI: | 8.76 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 62 | 12.42% |
| Cysteine CYS (C) | 7 | 1.4% |
| Glutamic Acid GLU (E) | 12 | 2.4% |
| Aspartic Acid ASP (D) | 29 | 5.81% |
| Glycine GLY (G) | 41 | 8.22% |
| Phynylalanine PHE (F) | 18 | 3.61% |
| Isoleucine ILE (I) | 10 | 2% |
| Histidine HIS (H) | 18 | 3.61% |
| Lysine LYS (K) | 19 | 3.81% |
| Methionine MET (M) | 12 | 2.4% |
| Leucine LEU (L) | 48 | 9.62% |
| Asparagine ASN (N) | 13 | 2.61% |
| Glutamine GLN (Q) | 19 | 3.81% |
| Proline PRO (P) | 28 | 5.61% |
| Serine SER (S) | 40 | 8.02% |
| Arginine ARG (R) | 28 | 5.61% |
| Threonine THR (T) | 25 | 5.01% |
| Tryptophan TRP (W) | 7 | 1.4% |
| Valine VAL (V) | 35 | 7.01% |
| Tyrosine TYR (Y) | 28 | 5.61% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2436 |
| Hydrogen | H | 3735 |
| Nitrogen | N | 677 |
| Oxygen | O | 707 |
| Sulphur | S | 19 |
| Formula | C2436H3735N677O707S19 |
| Total Number of Atoms: | 7574 |
| Total number of positively charged residues (ARG + LYS): | 47 |
| Total number of negatively charged residues (ASP + GLU): | 41 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 80595 Absorption 0.1% (=1 g/l) 1.481, assuming all pairs of CYS residues form cystines Ext. coefficient 80220 Absorption 0.1% (=1 g/l) 1.474, assuming all CYS residues are reduced |
| Aromaticity: | 0.106 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.90 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.26, 24.45, 26.85] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 78.0962 |
| Grand average of hydropathicity (GRAVY): | -0.18 |