Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4720 |
| Number of amino acids: | 389 |
| Molecular Weight: | 43551.71 Da |
| Theoretical pI: | 8.03 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 18 | 4.63% |
| Cysteine CYS (C) | 9 | 2.31% |
| Glutamic Acid GLU (E) | 21 | 5.4% |
| Aspartic Acid ASP (D) | 13 | 3.34% |
| Glycine GLY (G) | 30 | 7.71% |
| Phynylalanine PHE (F) | 26 | 6.68% |
| Isoleucine ILE (I) | 11 | 2.83% |
| Histidine HIS (H) | 3 | 0.77% |
| Lysine LYS (K) | 23 | 5.91% |
| Methionine MET (M) | 6 | 1.54% |
| Leucine LEU (L) | 46 | 11.83% |
| Asparagine ASN (N) | 25 | 6.43% |
| Glutamine GLN (Q) | 13 | 3.34% |
| Proline PRO (P) | 25 | 6.43% |
| Serine SER (S) | 30 | 7.71% |
| Arginine ARG (R) | 13 | 3.34% |
| Threonine THR (T) | 32 | 8.23% |
| Tryptophan TRP (W) | 7 | 1.8% |
| Valine VAL (V) | 21 | 5.4% |
| Tyrosine TYR (Y) | 17 | 4.37% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1981 |
| Hydrogen | H | 3022 |
| Nitrogen | N | 502 |
| Oxygen | O | 575 |
| Sulphur | S | 15 |
| Formula | C1981H3022N502O575S15 |
| Total Number of Atoms: | 6095 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 34 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 64330 Absorption 0.1% (=1 g/l) 1.477, assuming all pairs of CYS residues form cystines Ext. coefficient 63830 Absorption 0.1% (=1 g/l) 1.466, assuming all CYS residues are reduced |
| Aromaticity: | 0.129 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 37.74 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.90, 28.28, 23.39] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 77.4293 |
| Grand average of hydropathicity (GRAVY): | -0.22 |