Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4714 |
| Number of amino acids: | 660 |
| Molecular Weight: | 73848.96 Da |
| Theoretical pI: | 7.55 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 5.91% |
| Cysteine CYS (C) | 17 | 2.58% |
| Glutamic Acid GLU (E) | 31 | 4.7% |
| Aspartic Acid ASP (D) | 33 | 5% |
| Glycine GLY (G) | 44 | 6.67% |
| Phynylalanine PHE (F) | 37 | 5.61% |
| Isoleucine ILE (I) | 44 | 6.67% |
| Histidine HIS (H) | 8 | 1.21% |
| Lysine LYS (K) | 31 | 4.7% |
| Methionine MET (M) | 11 | 1.67% |
| Leucine LEU (L) | 59 | 8.94% |
| Asparagine ASN (N) | 40 | 6.06% |
| Glutamine GLN (Q) | 26 | 3.94% |
| Proline PRO (P) | 28 | 4.24% |
| Serine SER (S) | 62 | 9.39% |
| Arginine ARG (R) | 34 | 5.15% |
| Threonine THR (T) | 43 | 6.52% |
| Tryptophan TRP (W) | 10 | 1.52% |
| Valine VAL (V) | 38 | 5.76% |
| Tyrosine TYR (Y) | 25 | 3.79% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3300 |
| Hydrogen | H | 5119 |
| Nitrogen | N | 885 |
| Oxygen | O | 985 |
| Sulphur | S | 28 |
| Formula | C3300H5119N885O985S28 |
| Total Number of Atoms: | 10317 |
| Total number of positively charged residues (ARG + LYS): | 65 |
| Total number of negatively charged residues (ASP + GLU): | 64 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 93250 Absorption 0.1% (=1 g/l) 1.263, assuming all pairs of CYS residues form cystines Ext. coefficient 92250 Absorption 0.1% (=1 g/l) 1.249, assuming all CYS residues are reduced |
| Aromaticity: | 0.109 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 46.85 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.27, 26.36, 21.21] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.4697 |
| Grand average of hydropathicity (GRAVY): | -0.18 |