Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4707 |
| Number of amino acids: | 266 |
| Molecular Weight: | 28987.71 Da |
| Theoretical pI: | 6.95 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 14.66% |
| Cysteine CYS (C) | 1 | 0.38% |
| Glutamic Acid GLU (E) | 2 | 0.75% |
| Aspartic Acid ASP (D) | 1 | 0.38% |
| Glycine GLY (G) | 4 | 1.5% |
| Phynylalanine PHE (F) | 10 | 3.76% |
| Isoleucine ILE (I) | 11 | 4.14% |
| Histidine HIS (H) | 2 | 0.75% |
| Lysine LYS (K) | 1 | 0.38% |
| Methionine MET (M) | 4 | 1.5% |
| Leucine LEU (L) | 50 | 18.8% |
| Asparagine ASN (N) | 13 | 4.89% |
| Glutamine GLN (Q) | 53 | 19.92% |
| Proline PRO (P) | 22 | 8.27% |
| Serine SER (S) | 17 | 6.39% |
| Arginine ARG (R) | 2 | 0.75% |
| Threonine THR (T) | 9 | 3.38% |
| Tryptophan TRP (W) | 1 | 0.38% |
| Valine VAL (V) | 16 | 6.02% |
| Tyrosine TYR (Y) | 8 | 3.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1325 |
| Hydrogen | H | 2110 |
| Nitrogen | N | 344 |
| Oxygen | O | 373 |
| Sulphur | S | 5 |
| Formula | C1325H2110N344O373S5 |
| Total Number of Atoms: | 4157 |
| Total number of positively charged residues (ARG + LYS): | 3 |
| Total number of negatively charged residues (ASP + GLU): | 3 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 17420 Absorption 0.1% (=1 g/l) 0.601, assuming all pairs of CYS residues form cystines Ext. coefficient 17420 Absorption 0.1% (=1 g/l) 0.601, assuming all CYS residues are reduced |
| Aromaticity: | 0.071 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 62.40 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [36.09, 21.05, 35.71] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 121.541 |
| Grand average of hydropathicity (GRAVY): | 0.32 |