Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4705 |
| Number of amino acids: | 269 |
| Molecular Weight: | 29213.46 Da |
| Theoretical pI: | 7.12 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 42 | 15.61% |
| Cysteine CYS (C) | 1 | 0.37% |
| Glutamic Acid GLU (E) | 1 | 0.37% |
| Aspartic Acid ASP (D) | 1 | 0.37% |
| Glycine GLY (G) | 5 | 1.86% |
| Phynylalanine PHE (F) | 7 | 2.6% |
| Isoleucine ILE (I) | 15 | 5.58% |
| Histidine HIS (H) | 4 | 1.49% |
| Lysine LYS (K) | 1 | 0.37% |
| Methionine MET (M) | 3 | 1.12% |
| Leucine LEU (L) | 43 | 15.99% |
| Asparagine ASN (N) | 15 | 5.58% |
| Glutamine GLN (Q) | 63 | 23.42% |
| Proline PRO (P) | 18 | 6.69% |
| Serine SER (S) | 16 | 5.95% |
| Arginine ARG (R) | 1 | 0.37% |
| Threonine THR (T) | 13 | 4.83% |
| Tryptophan TRP (W) | 1 | 0.37% |
| Valine VAL (V) | 12 | 4.46% |
| Tyrosine TYR (Y) | 7 | 2.6% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1309 |
| Hydrogen | H | 2096 |
| Nitrogen | N | 360 |
| Oxygen | O | 388 |
| Sulphur | S | 4 |
| Formula | C1309H2096N360O388S4 |
| Total Number of Atoms: | 4157 |
| Total number of positively charged residues (ARG + LYS): | 2 |
| Total number of negatively charged residues (ASP + GLU): | 2 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 15930 Absorption 0.1% (=1 g/l) 0.545, assuming all pairs of CYS residues form cystines Ext. coefficient 15930 Absorption 0.1% (=1 g/l) 0.545, assuming all CYS residues are reduced |
| Aromaticity: | 0.056 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 59.96 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.60, 20.07, 33.09] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 112.639 |
| Grand average of hydropathicity (GRAVY): | 0.08 |