Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4703 |
| Number of amino acids: | 494 |
| Molecular Weight: | 54291.04 Da |
| Theoretical pI: | 5.58 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 38 | 7.69% |
| Cysteine CYS (C) | 8 | 1.62% |
| Glutamic Acid GLU (E) | 28 | 5.67% |
| Aspartic Acid ASP (D) | 33 | 6.68% |
| Glycine GLY (G) | 50 | 10.12% |
| Phynylalanine PHE (F) | 19 | 3.85% |
| Isoleucine ILE (I) | 27 | 5.47% |
| Histidine HIS (H) | 17 | 3.44% |
| Lysine LYS (K) | 28 | 5.67% |
| Methionine MET (M) | 10 | 2.02% |
| Leucine LEU (L) | 44 | 8.91% |
| Asparagine ASN (N) | 26 | 5.26% |
| Glutamine GLN (Q) | 11 | 2.23% |
| Proline PRO (P) | 22 | 4.45% |
| Serine SER (S) | 36 | 7.29% |
| Arginine ARG (R) | 18 | 3.64% |
| Threonine THR (T) | 23 | 4.66% |
| Tryptophan TRP (W) | 7 | 1.42% |
| Valine VAL (V) | 26 | 5.26% |
| Tyrosine TYR (Y) | 23 | 4.66% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2418 |
| Hydrogen | H | 3706 |
| Nitrogen | N | 654 |
| Oxygen | O | 736 |
| Sulphur | S | 18 |
| Formula | C2418H3706N654O736S18 |
| Total Number of Atoms: | 7532 |
| Total number of positively charged residues (ARG + LYS): | 46 |
| Total number of negatively charged residues (ASP + GLU): | 61 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 73270 Absorption 0.1% (=1 g/l) 1.350, assuming all pairs of CYS residues form cystines Ext. coefficient 72770 Absorption 0.1% (=1 g/l) 1.340, assuming all CYS residues are reduced |
| Aromaticity: | 0.099 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 34.95 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.55, 27.13, 24.29] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.0081 |
| Grand average of hydropathicity (GRAVY): | -0.34 |