Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4699 |
| Number of amino acids: | 849 |
| Molecular Weight: | 90280.92 Da |
| Theoretical pI: | 9.22 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 109 | 12.84% |
| Cysteine CYS (C) | 6 | 0.71% |
| Glutamic Acid GLU (E) | 50 | 5.89% |
| Aspartic Acid ASP (D) | 43 | 5.06% |
| Glycine GLY (G) | 63 | 7.42% |
| Phynylalanine PHE (F) | 29 | 3.42% |
| Isoleucine ILE (I) | 17 | 2% |
| Histidine HIS (H) | 14 | 1.65% |
| Lysine LYS (K) | 43 | 5.06% |
| Methionine MET (M) | 20 | 2.36% |
| Leucine LEU (L) | 78 | 9.19% |
| Asparagine ASN (N) | 26 | 3.06% |
| Glutamine GLN (Q) | 20 | 2.36% |
| Proline PRO (P) | 92 | 10.84% |
| Serine SER (S) | 63 | 7.42% |
| Arginine ARG (R) | 62 | 7.3% |
| Threonine THR (T) | 47 | 5.54% |
| Tryptophan TRP (W) | 4 | 0.47% |
| Valine VAL (V) | 56 | 6.6% |
| Tyrosine TYR (Y) | 7 | 0.82% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3966 |
| Hydrogen | H | 6386 |
| Nitrogen | N | 1156 |
| Oxygen | O | 1199 |
| Sulphur | S | 26 |
| Formula | C3966H6386N1156O1199S26 |
| Total Number of Atoms: | 12733 |
| Total number of positively charged residues (ARG + LYS): | 105 |
| Total number of negatively charged residues (ASP + GLU): | 93 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 32805 Absorption 0.1% (=1 g/l) 0.363, assuming all pairs of CYS residues form cystines Ext. coefficient 32430 Absorption 0.1% (=1 g/l) 0.359, assuming all CYS residues are reduced |
| Aromaticity: | 0.047 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 52.61 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [22.50, 28.74, 30.27] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 75.6066 |
| Grand average of hydropathicity (GRAVY): | -0.36 |