Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4698 |
| Number of amino acids: | 649 |
| Molecular Weight: | 72000.42 Da |
| Theoretical pI: | 8.75 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 6.63% |
| Cysteine CYS (C) | 18 | 2.77% |
| Glutamic Acid GLU (E) | 34 | 5.24% |
| Aspartic Acid ASP (D) | 34 | 5.24% |
| Glycine GLY (G) | 49 | 7.55% |
| Phynylalanine PHE (F) | 25 | 3.85% |
| Isoleucine ILE (I) | 30 | 4.62% |
| Histidine HIS (H) | 12 | 1.85% |
| Lysine LYS (K) | 42 | 6.47% |
| Methionine MET (M) | 15 | 2.31% |
| Leucine LEU (L) | 64 | 9.86% |
| Asparagine ASN (N) | 29 | 4.47% |
| Glutamine GLN (Q) | 22 | 3.39% |
| Proline PRO (P) | 24 | 3.7% |
| Serine SER (S) | 58 | 8.94% |
| Arginine ARG (R) | 37 | 5.7% |
| Threonine THR (T) | 34 | 5.24% |
| Tryptophan TRP (W) | 5 | 0.77% |
| Valine VAL (V) | 48 | 7.4% |
| Tyrosine TYR (Y) | 26 | 4.01% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3182 |
| Hydrogen | H | 5050 |
| Nitrogen | N | 882 |
| Oxygen | O | 955 |
| Sulphur | S | 33 |
| Formula | C3182H5050N882O955S33 |
| Total Number of Atoms: | 10102 |
| Total number of positively charged residues (ARG + LYS): | 79 |
| Total number of negatively charged residues (ASP + GLU): | 68 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 67365 Absorption 0.1% (=1 g/l) 0.936, assuming all pairs of CYS residues form cystines Ext. coefficient 66240 Absorption 0.1% (=1 g/l) 0.920, assuming all CYS residues are reduced |
| Aromaticity: | 0.086 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.77 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.51, 24.65, 24.04] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 84.5609 |
| Grand average of hydropathicity (GRAVY): | -0.23 |