Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4693 |
| Number of amino acids: | 355 |
| Molecular Weight: | 39617.52 Da |
| Theoretical pI: | 5.6 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 6.76% |
| Cysteine CYS (C) | 9 | 2.54% |
| Glutamic Acid GLU (E) | 27 | 7.61% |
| Aspartic Acid ASP (D) | 21 | 5.92% |
| Glycine GLY (G) | 31 | 8.73% |
| Phynylalanine PHE (F) | 18 | 5.07% |
| Isoleucine ILE (I) | 16 | 4.51% |
| Histidine HIS (H) | 8 | 2.25% |
| Lysine LYS (K) | 25 | 7.04% |
| Methionine MET (M) | 7 | 1.97% |
| Leucine LEU (L) | 26 | 7.32% |
| Asparagine ASN (N) | 16 | 4.51% |
| Glutamine GLN (Q) | 12 | 3.38% |
| Proline PRO (P) | 12 | 3.38% |
| Serine SER (S) | 31 | 8.73% |
| Arginine ARG (R) | 15 | 4.23% |
| Threonine THR (T) | 16 | 4.51% |
| Tryptophan TRP (W) | 6 | 1.69% |
| Valine VAL (V) | 21 | 5.92% |
| Tyrosine TYR (Y) | 14 | 3.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1755 |
| Hydrogen | H | 2695 |
| Nitrogen | N | 475 |
| Oxygen | O | 541 |
| Sulphur | S | 16 |
| Formula | C1755H2695N475O541S16 |
| Total Number of Atoms: | 5482 |
| Total number of positively charged residues (ARG + LYS): | 40 |
| Total number of negatively charged residues (ASP + GLU): | 48 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 54360 Absorption 0.1% (=1 g/l) 1.372, assuming all pairs of CYS residues form cystines Ext. coefficient 53860 Absorption 0.1% (=1 g/l) 1.359, assuming all CYS residues are reduced |
| Aromaticity: | 0.107 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.89 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [28.45, 25.35, 23.66] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.0563 |
| Grand average of hydropathicity (GRAVY): | -0.45 |