Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4682 |
| Number of amino acids: | 390 |
| Molecular Weight: | 45014.09 Da |
| Theoretical pI: | 9.11 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 15 | 3.85% |
| Cysteine CYS (C) | 7 | 1.79% |
| Glutamic Acid GLU (E) | 28 | 7.18% |
| Aspartic Acid ASP (D) | 22 | 5.64% |
| Glycine GLY (G) | 15 | 3.85% |
| Phynylalanine PHE (F) | 23 | 5.9% |
| Isoleucine ILE (I) | 23 | 5.9% |
| Histidine HIS (H) | 9 | 2.31% |
| Lysine LYS (K) | 21 | 5.38% |
| Methionine MET (M) | 6 | 1.54% |
| Leucine LEU (L) | 41 | 10.51% |
| Asparagine ASN (N) | 22 | 5.64% |
| Glutamine GLN (Q) | 10 | 2.56% |
| Proline PRO (P) | 10 | 2.56% |
| Serine SER (S) | 46 | 11.79% |
| Arginine ARG (R) | 37 | 9.49% |
| Threonine THR (T) | 23 | 5.9% |
| Tryptophan TRP (W) | 5 | 1.28% |
| Valine VAL (V) | 21 | 5.38% |
| Tyrosine TYR (Y) | 6 | 1.54% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1979 |
| Hydrogen | H | 3153 |
| Nitrogen | N | 577 |
| Oxygen | O | 598 |
| Sulphur | S | 13 |
| Formula | C1979H3153N577O598S13 |
| Total Number of Atoms: | 6320 |
| Total number of positively charged residues (ARG + LYS): | 58 |
| Total number of negatively charged residues (ASP + GLU): | 50 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 36815 Absorption 0.1% (=1 g/l) 0.818, assuming all pairs of CYS residues form cystines Ext. coefficient 36440 Absorption 0.1% (=1 g/l) 0.810, assuming all CYS residues are reduced |
| Aromaticity: | 0.087 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 66.71 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.51, 23.85, 23.08] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 83.4615 |
| Grand average of hydropathicity (GRAVY): | -0.47 |