Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4678 |
| Number of amino acids: | 499 |
| Molecular Weight: | 56550.58 Da |
| Theoretical pI: | 9.26 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 35 | 7.01% |
| Cysteine CYS (C) | 7 | 1.4% |
| Glutamic Acid GLU (E) | 27 | 5.41% |
| Aspartic Acid ASP (D) | 12 | 2.4% |
| Glycine GLY (G) | 33 | 6.61% |
| Phynylalanine PHE (F) | 28 | 5.61% |
| Isoleucine ILE (I) | 26 | 5.21% |
| Histidine HIS (H) | 11 | 2.2% |
| Lysine LYS (K) | 16 | 3.21% |
| Methionine MET (M) | 6 | 1.2% |
| Leucine LEU (L) | 35 | 7.01% |
| Asparagine ASN (N) | 35 | 7.01% |
| Glutamine GLN (Q) | 55 | 11.02% |
| Proline PRO (P) | 22 | 4.41% |
| Serine SER (S) | 40 | 8.02% |
| Arginine ARG (R) | 34 | 6.81% |
| Threonine THR (T) | 17 | 3.41% |
| Tryptophan TRP (W) | 4 | 0.8% |
| Valine VAL (V) | 37 | 7.41% |
| Tyrosine TYR (Y) | 19 | 3.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2502 |
| Hydrogen | H | 3881 |
| Nitrogen | N | 733 |
| Oxygen | O | 744 |
| Sulphur | S | 13 |
| Formula | C2502H3881N733O744S13 |
| Total Number of Atoms: | 7873 |
| Total number of positively charged residues (ARG + LYS): | 50 |
| Total number of negatively charged residues (ASP + GLU): | 39 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 50685 Absorption 0.1% (=1 g/l) 0.896, assuming all pairs of CYS residues form cystines Ext. coefficient 50310 Absorption 0.1% (=1 g/l) 0.890, assuming all CYS residues are reduced |
| Aromaticity: | 0.102 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 49.03 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.86, 26.05, 20.64] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 76.1924 |
| Grand average of hydropathicity (GRAVY): | -0.49 |