Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4677 |
| Number of amino acids: | 658 |
| Molecular Weight: | 71751.52 Da |
| Theoretical pI: | 7.35 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 34 | 5.17% |
| Cysteine CYS (C) | 7 | 1.06% |
| Glutamic Acid GLU (E) | 40 | 6.08% |
| Aspartic Acid ASP (D) | 24 | 3.65% |
| Glycine GLY (G) | 48 | 7.29% |
| Phynylalanine PHE (F) | 25 | 3.8% |
| Isoleucine ILE (I) | 25 | 3.8% |
| Histidine HIS (H) | 13 | 1.98% |
| Lysine LYS (K) | 28 | 4.26% |
| Methionine MET (M) | 11 | 1.67% |
| Leucine LEU (L) | 86 | 13.07% |
| Asparagine ASN (N) | 41 | 6.23% |
| Glutamine GLN (Q) | 21 | 3.19% |
| Proline PRO (P) | 36 | 5.47% |
| Serine SER (S) | 82 | 12.46% |
| Arginine ARG (R) | 36 | 5.47% |
| Threonine THR (T) | 36 | 5.47% |
| Tryptophan TRP (W) | 6 | 0.91% |
| Valine VAL (V) | 49 | 7.45% |
| Tyrosine TYR (Y) | 10 | 1.52% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3163 |
| Hydrogen | H | 5074 |
| Nitrogen | N | 888 |
| Oxygen | O | 977 |
| Sulphur | S | 18 |
| Formula | C3163H5074N888O977S18 |
| Total Number of Atoms: | 10120 |
| Total number of positively charged residues (ARG + LYS): | 64 |
| Total number of negatively charged residues (ASP + GLU): | 64 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 48275 Absorption 0.1% (=1 g/l) 0.673, assuming all pairs of CYS residues form cystines Ext. coefficient 47900 Absorption 0.1% (=1 g/l) 0.668, assuming all CYS residues are reduced |
| Aromaticity: | 0.062 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 44.17 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [30.55, 31.46, 25.99] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 92.5532 |
| Grand average of hydropathicity (GRAVY): | -0.19 |