Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4673 |
| Number of amino acids: | 293 |
| Molecular Weight: | 34095.8 Da |
| Theoretical pI: | 8.98 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 16 | 5.46% |
| Cysteine CYS (C) | 7 | 2.39% |
| Glutamic Acid GLU (E) | 11 | 3.75% |
| Aspartic Acid ASP (D) | 18 | 6.14% |
| Glycine GLY (G) | 20 | 6.83% |
| Phynylalanine PHE (F) | 21 | 7.17% |
| Isoleucine ILE (I) | 13 | 4.44% |
| Histidine HIS (H) | 6 | 2.05% |
| Lysine LYS (K) | 16 | 5.46% |
| Methionine MET (M) | 5 | 1.71% |
| Leucine LEU (L) | 23 | 7.85% |
| Asparagine ASN (N) | 15 | 5.12% |
| Glutamine GLN (Q) | 13 | 4.44% |
| Proline PRO (P) | 14 | 4.78% |
| Serine SER (S) | 17 | 5.8% |
| Arginine ARG (R) | 20 | 6.83% |
| Threonine THR (T) | 17 | 5.8% |
| Tryptophan TRP (W) | 10 | 3.41% |
| Valine VAL (V) | 17 | 5.8% |
| Tyrosine TYR (Y) | 14 | 4.78% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1553 |
| Hydrogen | H | 2323 |
| Nitrogen | N | 419 |
| Oxygen | O | 428 |
| Sulphur | S | 12 |
| Formula | C1553H2323N419O428S12 |
| Total Number of Atoms: | 4735 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 29 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 76235 Absorption 0.1% (=1 g/l) 2.236, assuming all pairs of CYS residues form cystines Ext. coefficient 75860 Absorption 0.1% (=1 g/l) 2.225, assuming all CYS residues are reduced |
| Aromaticity: | 0.154 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.11 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [33.45, 22.53, 18.77] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 70.2048 |
| Grand average of hydropathicity (GRAVY): | -0.42 |