Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4671 |
| Number of amino acids: | 498 |
| Molecular Weight: | 55560.75 Da |
| Theoretical pI: | 4.95 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 43 | 8.63% |
| Cysteine CYS (C) | 5 | 1% |
| Glutamic Acid GLU (E) | 40 | 8.03% |
| Aspartic Acid ASP (D) | 37 | 7.43% |
| Glycine GLY (G) | 28 | 5.62% |
| Phynylalanine PHE (F) | 31 | 6.22% |
| Isoleucine ILE (I) | 33 | 6.63% |
| Histidine HIS (H) | 9 | 1.81% |
| Lysine LYS (K) | 44 | 8.84% |
| Methionine MET (M) | 5 | 1% |
| Leucine LEU (L) | 32 | 6.43% |
| Asparagine ASN (N) | 21 | 4.22% |
| Glutamine GLN (Q) | 18 | 3.61% |
| Proline PRO (P) | 24 | 4.82% |
| Serine SER (S) | 37 | 7.43% |
| Arginine ARG (R) | 11 | 2.21% |
| Threonine THR (T) | 17 | 3.41% |
| Tryptophan TRP (W) | 4 | 0.8% |
| Valine VAL (V) | 40 | 8.03% |
| Tyrosine TYR (Y) | 19 | 3.82% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2514 |
| Hydrogen | H | 3866 |
| Nitrogen | N | 636 |
| Oxygen | O | 765 |
| Sulphur | S | 10 |
| Formula | C2514H3866N636O765S10 |
| Total Number of Atoms: | 7791 |
| Total number of positively charged residues (ARG + LYS): | 55 |
| Total number of negatively charged residues (ASP + GLU): | 77 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 50560 Absorption 0.1% (=1 g/l) 0.910, assuming all pairs of CYS residues form cystines Ext. coefficient 50310 Absorption 0.1% (=1 g/l) 0.905, assuming all CYS residues are reduced |
| Aromaticity: | 0.108 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 32.48 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.93, 22.09, 24.10] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 82.8313 |
| Grand average of hydropathicity (GRAVY): | -0.30 |