Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4669 |
| Number of amino acids: | 339 |
| Molecular Weight: | 33750.24 Da |
| Theoretical pI: | 6.99 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 104 | 30.68% |
| Cysteine CYS (C) | 0 | 0% |
| Glutamic Acid GLU (E) | 18 | 5.31% |
| Aspartic Acid ASP (D) | 9 | 2.65% |
| Glycine GLY (G) | 13 | 3.83% |
| Phynylalanine PHE (F) | 9 | 2.65% |
| Isoleucine ILE (I) | 7 | 2.06% |
| Histidine HIS (H) | 2 | 0.59% |
| Lysine LYS (K) | 25 | 7.37% |
| Methionine MET (M) | 2 | 0.59% |
| Leucine LEU (L) | 16 | 4.72% |
| Asparagine ASN (N) | 8 | 2.36% |
| Glutamine GLN (Q) | 8 | 2.36% |
| Proline PRO (P) | 25 | 7.37% |
| Serine SER (S) | 9 | 2.65% |
| Arginine ARG (R) | 2 | 0.59% |
| Threonine THR (T) | 42 | 12.39% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 26 | 7.67% |
| Tyrosine TYR (Y) | 14 | 4.13% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1515 |
| Hydrogen | H | 2408 |
| Nitrogen | N | 390 |
| Oxygen | O | 475 |
| Sulphur | S | 2 |
| Formula | C1515H2408N390O475S2 |
| Total Number of Atoms: | 4790 |
| Total number of positively charged residues (ARG + LYS): | 27 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20860 Absorption 0.1% (=1 g/l) 0.618 |
| Aromaticity: | 0.068 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 33.99 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [21.24, 16.22, 41.30] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.3806 |
| Grand average of hydropathicity (GRAVY): | 0.16 |