Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4657 |
| Number of amino acids: | 457 |
| Molecular Weight: | 50442.86 Da |
| Theoretical pI: | 8.82 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 36 | 7.88% |
| Cysteine CYS (C) | 21 | 4.6% |
| Glutamic Acid GLU (E) | 6 | 1.31% |
| Aspartic Acid ASP (D) | 18 | 3.94% |
| Glycine GLY (G) | 32 | 7% |
| Phynylalanine PHE (F) | 22 | 4.81% |
| Isoleucine ILE (I) | 17 | 3.72% |
| Histidine HIS (H) | 7 | 1.53% |
| Lysine LYS (K) | 25 | 5.47% |
| Methionine MET (M) | 12 | 2.63% |
| Leucine LEU (L) | 34 | 7.44% |
| Asparagine ASN (N) | 32 | 7% |
| Glutamine GLN (Q) | 22 | 4.81% |
| Proline PRO (P) | 33 | 7.22% |
| Serine SER (S) | 29 | 6.35% |
| Arginine ARG (R) | 11 | 2.41% |
| Threonine THR (T) | 39 | 8.53% |
| Tryptophan TRP (W) | 14 | 3.06% |
| Valine VAL (V) | 29 | 6.35% |
| Tyrosine TYR (Y) | 18 | 3.94% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 2266 |
| Hydrogen | H | 3443 |
| Nitrogen | N | 597 |
| Oxygen | O | 646 |
| Sulphur | S | 33 |
| Formula | C2266H3443N597O646S33 |
| Total Number of Atoms: | 6985 |
| Total number of positively charged residues (ARG + LYS): | 36 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 105070 Absorption 0.1% (=1 g/l) 2.083, assuming all pairs of CYS residues form cystines Ext. coefficient 103820 Absorption 0.1% (=1 g/l) 2.058, assuming all CYS residues are reduced |
| Aromaticity: | 0.118 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 30.09 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [29.32, 27.57, 19.26] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 69.803 |
| Grand average of hydropathicity (GRAVY): | -0.14 |