Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4656 |
| Number of amino acids: | 661 |
| Molecular Weight: | 73864 Da |
| Theoretical pI: | 5.14 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 5.9% |
| Cysteine CYS (C) | 3 | 0.45% |
| Glutamic Acid GLU (E) | 27 | 4.08% |
| Aspartic Acid ASP (D) | 54 | 8.17% |
| Glycine GLY (G) | 46 | 6.96% |
| Phynylalanine PHE (F) | 25 | 3.78% |
| Isoleucine ILE (I) | 31 | 4.69% |
| Histidine HIS (H) | 13 | 1.97% |
| Lysine LYS (K) | 32 | 4.84% |
| Methionine MET (M) | 12 | 1.82% |
| Leucine LEU (L) | 57 | 8.62% |
| Asparagine ASN (N) | 28 | 4.24% |
| Glutamine GLN (Q) | 20 | 3.03% |
| Proline PRO (P) | 45 | 6.81% |
| Serine SER (S) | 61 | 9.23% |
| Arginine ARG (R) | 29 | 4.39% |
| Threonine THR (T) | 42 | 6.35% |
| Tryptophan TRP (W) | 19 | 2.87% |
| Valine VAL (V) | 49 | 7.41% |
| Tyrosine TYR (Y) | 29 | 4.39% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3329 |
| Hydrogen | H | 5067 |
| Nitrogen | N | 873 |
| Oxygen | O | 1004 |
| Sulphur | S | 15 |
| Formula | C3329H5067N873O1004S15 |
| Total Number of Atoms: | 10288 |
| Total number of positively charged residues (ARG + LYS): | 61 |
| Total number of negatively charged residues (ASP + GLU): | 81 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 147835 Absorption 0.1% (=1 g/l) 2.001, assuming all pairs of CYS residues form cystines Ext. coefficient 147710 Absorption 0.1% (=1 g/l) 2.000, assuming all CYS residues are reduced |
| Aromaticity: | 0.110 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 31.79 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [31.77, 27.23, 20.42] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 79.3192 |
| Grand average of hydropathicity (GRAVY): | -0.36 |