Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4653 |
| Number of amino acids: | 420 |
| Molecular Weight: | 44238.79 Da |
| Theoretical pI: | 5.58 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 32 | 7.62% |
| Cysteine CYS (C) | 3 | 0.71% |
| Glutamic Acid GLU (E) | 16 | 3.81% |
| Aspartic Acid ASP (D) | 11 | 2.62% |
| Glycine GLY (G) | 23 | 5.48% |
| Phynylalanine PHE (F) | 19 | 4.52% |
| Isoleucine ILE (I) | 22 | 5.24% |
| Histidine HIS (H) | 5 | 1.19% |
| Lysine LYS (K) | 9 | 2.14% |
| Methionine MET (M) | 2 | 0.48% |
| Leucine LEU (L) | 58 | 13.81% |
| Asparagine ASN (N) | 21 | 5% |
| Glutamine GLN (Q) | 11 | 2.62% |
| Proline PRO (P) | 34 | 8.1% |
| Serine SER (S) | 58 | 13.81% |
| Arginine ARG (R) | 13 | 3.1% |
| Threonine THR (T) | 34 | 8.1% |
| Tryptophan TRP (W) | 2 | 0.48% |
| Valine VAL (V) | 41 | 9.76% |
| Tyrosine TYR (Y) | 6 | 1.43% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1998 |
| Hydrogen | H | 3204 |
| Nitrogen | N | 512 |
| Oxygen | O | 605 |
| Sulphur | S | 5 |
| Formula | C1998H3204N512O605S5 |
| Total Number of Atoms: | 6324 |
| Total number of positively charged residues (ARG + LYS): | 22 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 20065 Absorption 0.1% (=1 g/l) 0.454, assuming all pairs of CYS residues form cystines Ext. coefficient 19940 Absorption 0.1% (=1 g/l) 0.451, assuming all CYS residues are reduced |
| Aromaticity: | 0.064 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 45.86 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.24, 32.38, 25.71] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 110.214 |
| Grand average of hydropathicity (GRAVY): | 0.37 |