Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4643 |
| Number of amino acids: | 867 |
| Molecular Weight: | 98151.75 Da |
| Theoretical pI: | 6.82 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 51 | 5.88% |
| Cysteine CYS (C) | 4 | 0.46% |
| Glutamic Acid GLU (E) | 52 | 6% |
| Aspartic Acid ASP (D) | 38 | 4.38% |
| Glycine GLY (G) | 49 | 5.65% |
| Phynylalanine PHE (F) | 49 | 5.65% |
| Isoleucine ILE (I) | 51 | 5.88% |
| Histidine HIS (H) | 23 | 2.65% |
| Lysine LYS (K) | 34 | 3.92% |
| Methionine MET (M) | 27 | 3.11% |
| Leucine LEU (L) | 100 | 11.53% |
| Asparagine ASN (N) | 41 | 4.73% |
| Glutamine GLN (Q) | 26 | 3% |
| Proline PRO (P) | 25 | 2.88% |
| Serine SER (S) | 83 | 9.57% |
| Arginine ARG (R) | 53 | 6.11% |
| Threonine THR (T) | 55 | 6.34% |
| Tryptophan TRP (W) | 18 | 2.08% |
| Valine VAL (V) | 68 | 7.84% |
| Tyrosine TYR (Y) | 20 | 2.31% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 4423 |
| Hydrogen | H | 6929 |
| Nitrogen | N | 1191 |
| Oxygen | O | 1273 |
| Sulphur | S | 31 |
| Formula | C4423H6929N1191O1273S31 |
| Total Number of Atoms: | 13847 |
| Total number of positively charged residues (ARG + LYS): | 87 |
| Total number of negatively charged residues (ASP + GLU): | 90 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 129050 Absorption 0.1% (=1 g/l) 1.315, assuming all pairs of CYS residues form cystines Ext. coefficient 128800 Absorption 0.1% (=1 g/l) 1.312, assuming all CYS residues are reduced |
| Aromaticity: | 0.100 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 36.63 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.29, 22.84, 26.53] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 96.5512 |
| Grand average of hydropathicity (GRAVY): | -0.02 |