Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4641 |
| Number of amino acids: | 320 |
| Molecular Weight: | 35012.48 Da |
| Theoretical pI: | 9.17 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 24 | 7.5% |
| Cysteine CYS (C) | 4 | 1.25% |
| Glutamic Acid GLU (E) | 19 | 5.94% |
| Aspartic Acid ASP (D) | 8 | 2.5% |
| Glycine GLY (G) | 23 | 7.19% |
| Phynylalanine PHE (F) | 15 | 4.69% |
| Isoleucine ILE (I) | 34 | 10.63% |
| Histidine HIS (H) | 3 | 0.94% |
| Lysine LYS (K) | 27 | 8.44% |
| Methionine MET (M) | 3 | 0.94% |
| Leucine LEU (L) | 25 | 7.81% |
| Asparagine ASN (N) | 25 | 7.81% |
| Glutamine GLN (Q) | 18 | 5.63% |
| Proline PRO (P) | 21 | 6.56% |
| Serine SER (S) | 21 | 6.56% |
| Arginine ARG (R) | 8 | 2.5% |
| Threonine THR (T) | 12 | 3.75% |
| Tryptophan TRP (W) | 0 | 0% |
| Valine VAL (V) | 21 | 6.56% |
| Tyrosine TYR (Y) | 9 | 2.81% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1581 |
| Hydrogen | H | 2536 |
| Nitrogen | N | 420 |
| Oxygen | O | 460 |
| Sulphur | S | 7 |
| Formula | C1581H2536N420O460S7 |
| Total Number of Atoms: | 5004 |
| Total number of positively charged residues (ARG + LYS): | 35 |
| Total number of negatively charged residues (ASP + GLU): | 27 |
| Extinction Coefficient: | This protein does not contain any Tryptophan residues. Experience shows that this could result in more than 10% error in the computed extinction coefficient. Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 13660 Absorption 0.1% (=1 g/l) 0.390, assuming all pairs of CYS residues form cystines Ext. coefficient 13410 Absorption 0.1% (=1 g/l) 0.383, assuming all CYS residues are reduced |
| Aromaticity: | 0.075 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 43.40 This indicates that the protein/peptide is unstable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.50, 28.12, 22.19] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 98.4375 |
| Grand average of hydropathicity (GRAVY): | -0.12 |