Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4639 |
| Number of amino acids: | 339 |
| Molecular Weight: | 36043.42 Da |
| Theoretical pI: | 6.86 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 39 | 11.5% |
| Cysteine CYS (C) | 8 | 2.36% |
| Glutamic Acid GLU (E) | 15 | 4.42% |
| Aspartic Acid ASP (D) | 9 | 2.65% |
| Glycine GLY (G) | 28 | 8.26% |
| Phynylalanine PHE (F) | 23 | 6.78% |
| Isoleucine ILE (I) | 28 | 8.26% |
| Histidine HIS (H) | 10 | 2.95% |
| Lysine LYS (K) | 18 | 5.31% |
| Methionine MET (M) | 11 | 3.24% |
| Leucine LEU (L) | 38 | 11.21% |
| Asparagine ASN (N) | 7 | 2.06% |
| Glutamine GLN (Q) | 8 | 2.36% |
| Proline PRO (P) | 12 | 3.54% |
| Serine SER (S) | 29 | 8.55% |
| Arginine ARG (R) | 5 | 1.47% |
| Threonine THR (T) | 19 | 5.6% |
| Tryptophan TRP (W) | 2 | 0.59% |
| Valine VAL (V) | 25 | 7.37% |
| Tyrosine TYR (Y) | 5 | 1.47% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 1647 |
| Hydrogen | H | 2607 |
| Nitrogen | N | 409 |
| Oxygen | O | 456 |
| Sulphur | S | 19 |
| Formula | C1647H2607N409O456S19 |
| Total Number of Atoms: | 5138 |
| Total number of positively charged residues (ARG + LYS): | 23 |
| Total number of negatively charged residues (ASP + GLU): | 24 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 18950 Absorption 0.1% (=1 g/l) 0.526, assuming all pairs of CYS residues form cystines Ext. coefficient 18450 Absorption 0.1% (=1 g/l) 0.512, assuming all CYS residues are reduced |
| Aromaticity: | 0.088 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.16 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [35.69, 22.42, 30.38] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 108.82 |
| Grand average of hydropathicity (GRAVY): | 0.63 |