Physicochemical Properties of Peptide
| PPepDB ID: | PPepDB_4635 |
| Number of amino acids: | 640 |
| Molecular Weight: | 70730.21 Da |
| Theoretical pI: | 8.33 |
| Amino acid | Amino acid count | Amino acid percentage |
| Alanine ALA (A) | 30 | 4.69% |
| Cysteine CYS (C) | 28 | 4.38% |
| Glutamic Acid GLU (E) | 30 | 4.69% |
| Aspartic Acid ASP (D) | 34 | 5.31% |
| Glycine GLY (G) | 56 | 8.75% |
| Phynylalanine PHE (F) | 26 | 4.06% |
| Isoleucine ILE (I) | 34 | 5.31% |
| Histidine HIS (H) | 11 | 1.72% |
| Lysine LYS (K) | 39 | 6.09% |
| Methionine MET (M) | 9 | 1.41% |
| Leucine LEU (L) | 69 | 10.78% |
| Asparagine ASN (N) | 38 | 5.94% |
| Glutamine GLN (Q) | 20 | 3.13% |
| Proline PRO (P) | 25 | 3.91% |
| Serine SER (S) | 49 | 7.66% |
| Arginine ARG (R) | 32 | 5% |
| Threonine THR (T) | 34 | 5.31% |
| Tryptophan TRP (W) | 8 | 1.25% |
| Valine VAL (V) | 48 | 7.5% |
| Tyrosine TYR (Y) | 20 | 3.13% |
| Element | Element's Abbreviation | Count |
| Carbon | C | 3129 |
| Hydrogen | H | 4955 |
| Nitrogen | N | 863 |
| Oxygen | O | 930 |
| Sulphur | S | 37 |
| Formula | C3129H4955N863O930S37 |
| Total Number of Atoms: | 9914 |
| Total number of positively charged residues (ARG + LYS): | 71 |
| Total number of negatively charged residues (ASP + GLU): | 64 |
| Extinction Coefficient: | Extinction coefficients are in units of M-1 cm-1, at 280 nm measured in water. Ext. coefficient 75550 Absorption 0.1% (=1 g/l) 1.068, assuming all pairs of CYS residues form cystines Ext. coefficient 73800 Absorption 0.1% (=1 g/l) 1.043, assuming all CYS residues are reduced |
| Aromaticity: | 0.084 Aromaticity is the calculated relative frequency of Phe+Trp+Tyr |
| Instability Index: | The computed Instability Index (II) is : 35.88 This indicates that the protein/peptide is stable |
| Secondary Structure Fraction [Helix, Turn, Sheet]: | [32.03, 26.25, 21.56] Amino acids in helix: V, I, Y, F, W, L || Amino acids in turn: N, P, G, S || Amino acids in sheet: E, M, A, L |
| Aliphatic index: | 89.2029 |
| Grand average of hydropathicity (GRAVY): | -0.14 |